Special Issue: Developing and applying the mathematical descriptor in DNA/RNA and proteins identification

Guest Editor

Prof. Hao Lin
Center for Informational Biology, University of Electronic Science and Technology of China, China
Email: hlin@uestc.edu.cn

Manuscript Topics
During the past three decades, computational biology has become an increasingly important research area in biological sciences. With the emergence of huge volumes of DNA/RNA and proteins data, it is urgent to develop various of computational methods to deal with these data. As the basic data in biological analysis, sequence analysis has been widely concerned by researchers. It is the direction of scientific researchers to design and develop a reliable mathematical description method to describe the sequence without losing the information contained in the sequence. In recent years, some mathematical descriptor about DNA/RNA and protein sequences have been developed and achieved encouraging results. To better promote the development of mathematical descriptor, we invite authors to contribute review articles and research papers on mathematical description resources and methods for all aspects of biological data studies. The special issue aims to provide an open, multidisciplinary forum for mathematical description about DNA/RNA and protein data analysis.


Potential topics include, but are not limited to:


New mathematical description in DNA/RNA and protein sequences
The mathematical description database or lasting database with substantial updates;
New web services or existing web services with substantial updates for DNA/RNA and protein sequence description;
The application of mathematical description in DNA/RNA and protein analysis;
New or better standalone mathematical description programs and tools;
Optimizing mathematical descriptors for DNA/RNA and protein data;
Novel epigenetic- and three-dimension feature-based descriptor for biological data


Instructions for authors
http://www.aimspress.com/mbe/news/solo-detail/instructionsforauthors
Please submit your manuscript to online submission system
https://aimspress.jams.pub/

Paper Submission

All manuscripts will be peer-reviewed before their acceptance for publication. The deadline for manuscript submission is 30 January 2022

Published Papers(12)

Correction
Correction: Triclustering method for finding biomarkers in human immunodeficiency virus-1 gene expression data
Titin Siswantining Alhadi Bustamam Devvi Sarwinda Saskya Mary Soemartojo Moh. Abdul Latief Elke Annisa Octaria Anggrainy Togi Marito Siregar Oon Septa Herley Shaori Al-Ash Noval Saputra
2023, Volume 20, Issue 4: 7298-7301. doi: 10.3934/mbe.2023316
Abstract HTML PDF Viewed (1512)
Research article
Triclustering method for finding biomarkers in human immunodeficiency virus-1 gene expression data
Titin Siswantining Alhadi Bustamam Devvi Sarwinda Saskya Mary Soemartojo Moh. Abdul Latief Elke Annisa Octaria Anggrainy Togi Marito Siregar Oon Septa Herley Shaori Al-Ash Noval Saputra
2022, Volume 19, Issue 7: 6743-6763. doi: 10.3934/mbe.2022318
Abstract HTML PDF Cited (4) Viewed (2585)
Research article
Identification of protein functions in mouse with a label space partition method
Xuan Li Lin Lu Lei Chen
2022, Volume 19, Issue 4: 3820-3842. doi: 10.3934/mbe.2022176
Abstract HTML PDF Cited (30) Viewed (2390)
Research article
Drug repositioning of COVID-19 based on mixed graph network and ion channel
Xianfang Wang Qimeng Li Yifeng Liu Zhiyong Du Ruixia Jin
2022, Volume 19, Issue 4: 3269-3284. doi: 10.3934/mbe.2022151
Abstract HTML PDF Cited (2) Viewed (2974)
Research article
UPFPSR: a ubiquitylation predictor for plant through combining sequence information and random forest
Shuwan Yin Jia Zheng Cangzhi Jia Quan Zou Zhengkui Lin Hua Shi
2022, Volume 19, Issue 1: 775-791. doi: 10.3934/mbe.2022035
Abstract HTML PDF Viewed (2345)
Research article
Construction of competitive endogenous RNA network related to circular RNA and prognostic nomogram model in lung adenocarcinoma
Pingping Song Jing Chen Xu Zhang Xiaofeng Yin
2021, Volume 18, Issue 6: 9806-9821. doi: 10.3934/mbe.2021481
Abstract HTML PDF Cited (1) Viewed (3318)
Research article
iEnhancer-MFGBDT: Identifying enhancers and their strength by fusing multiple features and gradient boosting decision tree
Yunyun Liang Shengli Zhang Huijuan Qiao Yinan Cheng
2021, Volume 18, Issue 6: 8797-8814. doi: 10.3934/mbe.2021434
Abstract HTML PDF Cited (11) Viewed (3396)
Research article
An epistasis and heterogeneity analysis method based on maximum correlation and maximum consistence criteria
Xia Chen Yexiong Lin Qiang Qu Bin Ning Haowen Chen Xiong Li
2021, Volume 18, Issue 6: 7711-7726. doi: 10.3934/mbe.2021382
Abstract HTML PDF Viewed (2814)
Research article
Prediction of conotoxin type based on long short-term memory network
Feng Wang Shan Chang Dashun Wei
2021, Volume 18, Issue 5: 6700-6708. doi: 10.3934/mbe.2021332
Abstract HTML PDF Cited (2) Viewed (2956)
Research article
Prediction of presynaptic and postsynaptic neurotoxins based on feature extraction
Wen Zhu Yuxin Guo Quan Zou
2021, Volume 18, Issue 5: 5943-5958. doi: 10.3934/mbe.2021297
Abstract HTML PDF Cited (2) Viewed (2940)
Research article
A new DNA coding and hyperchaotic system based asymmetric image encryption algorithm
Min Liu Guodong Ye
2021, Volume 18, Issue 4: 3887-3906. doi: 10.3934/mbe.2021194
Abstract HTML PDF Cited (18) Viewed (3610)
Research article
Computational identification of N4-methylcytosine sites in the mouse genome with machine-learning method
Hasan Zulfiqar Rida Sarwar Khan Farwa Hassan Kyle Hippe Cassandra Hunt Hui Ding Xiao-Ming Song Renzhi Cao
2021, Volume 18, Issue 4: 3348-3363. doi: 10.3934/mbe.2021167
Abstract HTML PDF Cited (16) Viewed (4267)