Research article

A new structure entropy of complex networks based on nonextensive statistical mechanics and similarity of nodes

  • Received: 25 February 2021 Accepted: 13 April 2021 Published: 29 April 2021
  • Entropy has been widely measured the complexity of complex networks. At present, many measures about entropies were defined based on the directed connection of nodes. The similarity of nodes can better represent the relationship among all nodes in complex networks. In the definition of similarity of nodes, the importance of a node in the network depends not only on the degree of the node itself, but also on the extent of dependence of neighboring nodes on the node. In this paper, we proposed a new structure entropy based on nonextensive statistical mechanics and similarity of nodes. In the proposed method, the similarity of nodes and the betweenness of nodes are both quantified. The proposed method considers the extent of dependence between neighbouring nodes. For some complex networks, the proposed structure entropy can distinguish complexity of that while other entropies can not be. Meanwhile, we construct five ER random networks and small-world networks and some real-world complex networks such as the US Air Lines networks, the GD'01-GD Proceedings Self-Citing networks, the Science Theory networks, the Centrality Literature networks and the Yeast networks are measured by the proposed method. The results illustrated our method for quantifying the complexity of complex networks is effective.

    Citation: Bing Wang, Fu Tan, Jia Zhu, Daijun Wei. A new structure entropy of complex networks based on nonextensive statistical mechanics and similarity of nodes[J]. Mathematical Biosciences and Engineering, 2021, 18(4): 3718-3732. doi: 10.3934/mbe.2021187

    Related Papers:

  • Entropy has been widely measured the complexity of complex networks. At present, many measures about entropies were defined based on the directed connection of nodes. The similarity of nodes can better represent the relationship among all nodes in complex networks. In the definition of similarity of nodes, the importance of a node in the network depends not only on the degree of the node itself, but also on the extent of dependence of neighboring nodes on the node. In this paper, we proposed a new structure entropy based on nonextensive statistical mechanics and similarity of nodes. In the proposed method, the similarity of nodes and the betweenness of nodes are both quantified. The proposed method considers the extent of dependence between neighbouring nodes. For some complex networks, the proposed structure entropy can distinguish complexity of that while other entropies can not be. Meanwhile, we construct five ER random networks and small-world networks and some real-world complex networks such as the US Air Lines networks, the GD'01-GD Proceedings Self-Citing networks, the Science Theory networks, the Centrality Literature networks and the Yeast networks are measured by the proposed method. The results illustrated our method for quantifying the complexity of complex networks is effective.



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    [1] I. Grabska-Gradziska, A. Kulig, J. Jaroslaw, S. Drozds, Complex network analysis of literary and scientific texts, Int. J. Mod. Phys. C, 23 (2012), 1250051. doi: 10.1142/S0129183112500519
    [2] M. Liu, Y. M. Yan, Y. Huang, Complex system and its application in urban transportation network, Ence. Technol. Rev., 25 (2017), 27–33.
    [3] T. Wang, L. L. Wu, J. Zhang, Research on Correlation Properties of Urban Transit Network Based on Complex Network, J. Aca. Mili. Trans., 011 (2009), 10–15.
    [4] R. Sen, F. Hsieh, A note on testing regime switching assumption based on recurrence times, Stat. Probabil. Lett., 79 (2009), 2443–2450. doi: 10.1016/j.spl.2009.08.025
    [5] D. Wang, J. L. Gao, D. J. Wei, A New Belief Entropy Based on Deng Entropy, Entropy, 21 (2019), 987–998. doi: 10.3390/e21100987
    [6] G. D'Antonio, P. Macklin, L. G. Preziosi, An agent-based model for elasto-plastic mechanical interactions between cells, basement membrane and extracellular matrix, Math. Biosci. Eng., 10 (2013), 75–101. doi: 10.3934/mbe.2013.10.75
    [7] D. J. Watts, S. H. Strogatz, Collective dynamics of small-world networks, Nature, 393 (1998), 440–442. doi: 10.1038/30918
    [8] V. Kalapala, V. Sanwalani, A. Clauset, C. Moore, Scale invariance in road networks, Phys. Rev. E, 73 (2006), 026130. doi: 10.1103/PhysRevE.73.026130
    [9] P. B. Fuentes, L. P. Padilla, M. C. Barriga, A. M. Lara, Modeling some properties of circadian rhythms, Math. Biosci. Eng., 11 (2014), 317–330. doi: 10.3934/mbe.2014.11.317
    [10] P. Colomeru, M. Serrano, J. I. Alvarez, Deciphering the global organization of clustering in real complex networks, Sci. Rep., 3 (2013), 2517–2524. doi: 10.1038/srep02517
    [11] A. Guttman, A Dynamic Index Structure for Spatial Searching, Acm. Sigmod. Rec., 14 (1984), 47–57. doi: 10.1145/971697.602266
    [12] T. Wen, Y. Deng, Identification of influencers in complex networks by local information dimensionality, Inform. Sci., 512 (2019), 549–562.
    [13] P. Gabriel, Global stability for the prion equation with general incidence, Math. Biosci. Eng., 12 (2015), 789–801. doi: 10.3934/mbe.2015.12.789
    [14] T. Wen, P. Danilo, Y. Deng, Vital spreaders identification in complex networks with multi-local dimension, Knowl-Based Syst., 195 (2020), 105717. doi: 10.1016/j.knosys.2020.105717
    [15] B. Ginestra, Centralities of nodes and influences of layers in large multiplex networks, J. Comp. Netw., 5 (2017), 5–17.
    [16] X. L. Tong, J. G. Liu, J. P. Wang, Q. Guo, J. Ni, Ranking the spreading ability of nodes in network core, Int. J. Mod. Phys. C., 26 (2015), 12305–12310.
    [17] M. Shiino, M. Yamana, Statistical mechanics of stochastic neural networks: Relationship between the self-consistent signal-to-noise analysis, Thouless-Anderson-Palmer equation, and replica symmetric calculation approaches, Phys. Rev. E, 69 (2004), 11904–11905. doi: 10.1103/PhysRevE.69.011904
    [18] C. M. Xing, F. G. Liu, Research on the deterministic complex network model based on the Sierpinski network, Acta. Phys. Sin., 59 (2010), 1608–1615.
    [19] T. Wen, Y. Deng, The vulnerability of communities in complex networks: An entropy approach, Reliab. Eng. Syst. Safe., 196 (2020), 106782. doi: 10.1016/j.ress.2019.106782
    [20] J. J. Stewart, C. Y. Lee, S. Ibrahim, P. Watts, M. Shlomchik, M. Weigert, et al., A Shannon entropy analysis of immunoglobulin and T cell receptor, Mol. Immunol., 34 (1997), 1067–1082. doi: 10.1016/S0161-5890(97)00130-2
    [21] M. X. Liu, S. S. He, Y. Z. Sun, The impact of media converge on complex networks on disease transmission, Math. Biosci. Eng., 16 (2019), 6335–6349. doi: 10.3934/mbe.2019316
    [22] Q. Zhang, M. Z. Li, Y. Deng, A betweenness structure entropy of complex networks, preprint, arXiv: 1407.0097.
    [23] Y. Z. Yang, L. Yu, X. Wang, S. Y. Chen, Y. Chen, Y. P. Zhou, A novel method to identify influential nodes in complex networks, Int. J. Mod. Phys. C., 31 (2019), 52–61.
    [24] J. M.-T. Wu, J. C.-W. Lin, P. Fournier-Viger, Y. Djenouri, C.-H. Chen, Z. C. Li, The density-based clustering method for privacy-preserving data mining, Math. Biosci. Eng., 16 (2019), 1718–1728. doi: 10.3934/mbe.2019082
    [25] H. L. Huang, The degree sequences of an asymmetrical growing network, Stat. Probabil. Lett., 79 (2009), 420–425. doi: 10.1016/j.spl.2008.09.010
    [26] M. L. Lei, L. R. Liu, D. J. Wei, An Improved Method for Measuring the Complexity in Complex Networks Based on Structure Entropy, IEEE Access, 99 (2019), 1–16.
    [27] J. Bruhn, L. Lehmann, H. Rpcke, T. Bouillon, A. Hoeft, Shannon entropy applied to the measurement of the electroencephalographic effects of desflurane, Anesthesiology, 95 (2001), 30–35. doi: 10.1097/00000542-200107000-00010
    [28] Y. Xiao, W. Wu, M. Xiong, W. Wang, Symmetry based Structure Entropy of Complex Networks, Physica A, 387 (2007), 2611–2619.
    [29] Y. R. Ruan, S.Y. Lao, J. D. Wang, L. Bai, L. D. Chen, Node importance measurement based on neighborhood similarity in complex network, Acta. Phys. Sin., 66 (2017), 371–379.
    [30] Q. Chen, H. H. Li, N. F. Xiao, Community recommendation algorithm based on dynamic attributes similarity of nodes in social networks, J. Comput. Appl., 30 (2010), 1268–1272.
    [31] D. W. Ding, X. F. Peng, Identification of the key nodes in biological networks based on the similarity of overlapping communities, Comput. Appl. Chem., 31 (2014), 1213–1216.
    [32] Q. Zhang, M. Z. Li, Y. Deng, Measure the structure similarity of nodes in complex networks based on relative entropy, Phys. A, 24 (2017), S0378437117309354.
    [33] Wolfe, W. Alvin, Social Network Analysis: Methods and Applications, Contemp. Sociol., 91 (1995), 219–220.
    [34] M. Rubinov, O. Sporns, Complex network measures of brain connectivity: Uses and interpretations, Neuroimage, 52 (2010), 1059–1069. doi: 10.1016/j.neuroimage.2009.10.003
    [35] P. Erdös, A. Rényi, On the evolution of random graphs, Publ. Math. Inst. Hung. Acad. Sci., 5 (1960), 17–60.
    [36] Pajek datasets, 2014, http://vlado.fmf.uni-lj.si/pub/networks/data/.
    [37] X. M. Zhai, W. L. Zhou, G. L. Fei, C. Lu, S. Wen, G. M. Hu, Edge-based stochastic network model reveals structural complexity of edges, Future. Gener. Comp. Syst., 100 (2019), 1073–1087. doi: 10.1016/j.future.2019.05.047
    [38] L. D. Fu, W. Hao, D. Li, F. Li, Community dividing algorithm based on similarity of common neighbor nodes, J. Comput. Appl., 39 (2019), 2024–2029.
    [39] Z. L. Zhuang, Z. Y. Lu, Z. Z. Huang, C. L. Liu, W. Qin, A novel complex network based dynamic rule selection approach for open shop scheduling problem with release dates, Math. Biosci. Eng., 16 (2019), 4491–4505. doi: 10.3934/mbe.2019224
    [40] C. Tsallis, Possible generalization of Boltzmann-Gibbs statistics, J. Stat. Phys., 52 (1988), 479–487. doi: 10.1007/BF01016429
    [41] W. Yun, G. B. Zhang, X. F. Zhang, Multilevel Image Thresholding Using Tsallis Entropy and Cooperative Pigeon-inspired Optimization Bionic Algorithm, J. Bionic. Eng., 16 (2019), 954–964. doi: 10.1007/s42235-019-0109-1
    [42] R. Alejandro, L. D. G. Sigalott, E. L. F. Marquez, Non-extensive statistics in time series: Tsallis theory, Alejandro, 78 (2019), 139–150.
    [43] H. Bourlés, B. Marinescu, U. Oberst, Exponentially Stable Linear Time-Varying Discrete Behaviors, Siam. J. Control., 53 (2018), 63–68.
    [44] Babajanyan, A. Armen, H. C. Kang, Energy and entropy: Path from game theory to statistical mechanics, Phys. Rev. Res., 2 (2020).
    [45] Q. Zhang, M. Z. Li, Y. Deng, A new structure entropy of complex networks based on nonextensive statistical mechanics, Int. J. Mod. Phys. C., 27 (2016), 1650118. doi: 10.1142/S0129183116501187
    [46] C. Wang, Z. X. Tan, Y. Ye, L. Wang, A rumor spreading model based on information entropy, Sci. Rep., 7 (2017), 9615–9620. doi: 10.1038/s41598-017-09171-8
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