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Inference on the effect of non homogeneous inputs in Ornstein-Uhlenbeck neuronal modeling

  • Received: 08 July 2019 Accepted: 25 September 2019 Published: 09 October 2019
  • A non-homogeneous Ornstein-Uhlembeck (OU) diffusion process is considered as a model for the membrane potential activity of a single neuron. We assume that, in the absence of stimuli, the neuron activity is described via a time-homogeneous process with linear drift and constant infinitesimal variance. When a sequence of inhibitory and excitatory post-synaptic potentials occurres with generally time-dependent rates, the membrane potential is then modeled by means of a non-homogeneous OU-type process. From a biological point of view it becomes important to understand the behavior of the membrane potential in the presence of such stimuli. This issue means, from a statistical point of view, to make inference on the resulting process modeling the phenomenon. To this aim, we derive some probabilistic properties of a non-homogeneous OU-type process and we provide a statistical procedure to fit the constant parameters and the time-dependent functions involved in the model. The proposed methodology is based on two steps: the first one is able to estimate the constant parameters, while the second one fits the non-homogeneous terms of the process. Related to the second step two methods are considered. Some numerical evaluations based on simulation studies are performed to validate and to compare the proposed procedures.

    Citation: Giuseppina Albano, Virginia Giorno. Inference on the effect of non homogeneous inputs in Ornstein-Uhlenbeck neuronal modeling[J]. Mathematical Biosciences and Engineering, 2020, 17(1): 328-348. doi: 10.3934/mbe.2020018

    Related Papers:

  • A non-homogeneous Ornstein-Uhlembeck (OU) diffusion process is considered as a model for the membrane potential activity of a single neuron. We assume that, in the absence of stimuli, the neuron activity is described via a time-homogeneous process with linear drift and constant infinitesimal variance. When a sequence of inhibitory and excitatory post-synaptic potentials occurres with generally time-dependent rates, the membrane potential is then modeled by means of a non-homogeneous OU-type process. From a biological point of view it becomes important to understand the behavior of the membrane potential in the presence of such stimuli. This issue means, from a statistical point of view, to make inference on the resulting process modeling the phenomenon. To this aim, we derive some probabilistic properties of a non-homogeneous OU-type process and we provide a statistical procedure to fit the constant parameters and the time-dependent functions involved in the model. The proposed methodology is based on two steps: the first one is able to estimate the constant parameters, while the second one fits the non-homogeneous terms of the process. Related to the second step two methods are considered. Some numerical evaluations based on simulation studies are performed to validate and to compare the proposed procedures.


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    [1] G. L. Gerstein and B. Mandelbrot, Random walk models for the spike activity of a single neuron, Biophys. J., 4 (1964), 41-68.
    [2] H. C. Tuckwell, Introduction to Theoretical Neurobiology 2. Nonlinear and Stochastic Theories, Cambridge Univ. Press, Cambridge, 1988.
    [3] S. Ditlevsen and P. Lánský, Estimation of the input parameters in the Ornstein-Uhlenbeck neuronal ´ model, Phys. Rev. E, 71 (2005), 011907.
    [4] P. Lánský, P. Sanda and J. He, The parameters of the stochastic leaky integrate-and-fire neuronal model, J. Comput. Neurosci., 21 (2006), 211-223.
    [5] S. Ditlevsen and P. Lánský, Comparison of statistical methods for estimation of the input parameters in the Ornstein-Uhlenbeck neuronal model from first-passage times data, in: "American Institute of Physics Proceedings Series, CP1028, Collective Dynamics: Topics on Competition and Cooperation in the Biosciences", Eds.: L.M. Ricciardi, A. Buonocore, and E. Pirozzi, (2008), 171-185.
    [6] E. Bibbona and S. Ditlevsen, Estimation in Discretely Observed Diffusions Killed at a Threshold, Scand J. Stat., 40 (2012), 274-293.
    [7] R. Kobayashi and P. Lansky, Estimation of the synaptic input firing rates and characterization of the stimulation effects in an auditory neuron, Front. Comput. Neurosci., 9 (2015), 59.
    [8] S. Ditlevsen and A. Samson, Parameter estimation in neuronal stochastic differential equation models from intracellular recordings of membrane potentials in single neurons: a Review, J. de la Socié 157 (2016), 6-16.
    [9] U. Picchini, S. Ditlevsen, A. De Gaetano, et al., Parameters of the Diffusion Leaky Integrate-andFire Neuronal Model for a Slowly Fluctuating Signal, Neural Comput., 20 (2008), 2696-2714.
    [10] U. Picchini, S. Ditlevsen and A. De Gaetano, Stochastic differential mixed-effects models, Scand J. Stat., 37 (2010), 67-90.
    [11] C. Dion, Nonparametric estimation in a mixed-effect Ornstein-Uhlenbeck model, Metrika, 79 (2016), 919-951.
    [12] A. N. Burkitt, A review of the integrate-and-fire neuron model: Ⅱ. Inhomogeneous synaptic input and network properties, Biol. Cybern., 95 (2006), 97-112.
    [13] W. Gerstner, W.M. Kistler, R. Naud and L. Paninski, Neuronal Dynamics From single neurons to networks and models of cognition, University Press, 2014.
    [14] N. Brunel, V. Hakim and M. J. Richardson, Firing-rate resonance in a generalized integrate-andfire neuron with subthreshold resonance, Phys. Rev. E, 67 (2003), 051916.
    [15] A. Buonocore, L. Caputo, A. G. Nobile, et al., Gauss-Markov processes in the presence of a reflecting boundary and applications in neuronal models, Appl. Math. Comput., 232 (2014), 799- 809.
    [16] G. D'Onofrio and E. Pirozzi, Successive spike times predicted by a stochastic neuronal model with a variable input signal, Math. Biosci. Eng., 13 (2016), 495-507.
    [17] A. Buonocore, L. Caputo, A. G. Nobile, et al., Restricted Ornstein Uhlenbeck process and applications in neuronal models with periodic input signals, J. Comput. Appl. Math., 285 (2015), 59-71.
    [18] A. R. Bulsara, T. C. Elston, C. R. Doering, et al., Cooperative behavior in periodically driven noisy integrate-fire models of neuronal dynamics, Phys. Rev. E, 53 (1996), 3958-3969.
    [19] A. Longtin, Stochastic resonance in neuron models, J. Stat. Phys., 70 (1993), 309-327.
    [20] K. Pakdaman, S. Tanabe and T. Shimokawa, Coherence resonance and discharge time reliability in neurons and neuronal models, Neural Netw., 14 (2001), 895-905.
    [21] A. Buonocore, L. Caputo and E. Pirozzi, On the evaluation of firing densities for periodically driven neuron models, Math. Biosci., 214 (2008), 122-133.
    [22] M. Giraudo, P. Greenwood and L. Sacerdote, How sample paths of leaky integrate-and-fire models are influenced by the presence of a firing threshold, Neural Comput., 23 (2011), 1743-1767.
    [23] L. M. Ricciardi, A. Di Crescenzo, V. Giorno, et al., An outline of theoretical and algorithmic approaches to first passage time problems with applications to biological modeling, Math. Japonica, 50 (1999), 247-322.
    [24] D. P. Kroese, T. Taimre and Z. I. Botev, Handbook of Monte Carlo Methods, Wiley Series in Probability and Statistics, John Wiley & Sons, Hoboken, NJ, 2011.
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