1.
|
Paul Macklin, Shannon Mumenthaler, John Lowengrub,
2013,
Chapter 150,
978-3-642-36481-5,
349,
10.1007/8415_2012_150
|
|
2.
|
MunJu Kim, Damon Reed, Katarzyna A. Rejniak,
The formation of tight tumor clusters affects the efficacy of cell cycle inhibitors: A hybrid model study,
2014,
352,
00225193,
31,
10.1016/j.jtbi.2014.02.027
|
|
3.
|
Patrícia Santos-Oliveira, António Correia, Tiago Rodrigues, Teresa M Ribeiro-Rodrigues, Paulo Matafome, Juan Carlos Rodríguez-Manzaneque, Raquel Seiça, Henrique Girão, Rui D. M. Travasso, Hans Van Oosterwyck,
The Force at the Tip - Modelling Tension and Proliferation in Sprouting Angiogenesis,
2015,
11,
1553-7358,
e1004436,
10.1371/journal.pcbi.1004436
|
|
4.
|
Gianluca Ascolani, Timothy M. Skerry, Damien Lacroix, Enrico Dall’Ara, Aban Shuaib,
Revealing hidden information in osteoblast’s mechanotransduction through analysis of time patterns of critical events,
2020,
21,
1471-2105,
10.1186/s12859-020-3394-0
|
|
5.
|
Nick Štorgel, Matej Krajnc, Polona Mrak, Jasna Štrus, Primož Ziherl,
Quantitative Morphology of Epithelial Folds,
2016,
110,
00063495,
269,
10.1016/j.bpj.2015.11.024
|
|
6.
|
Zuzanna Szymańska, Maciej Cytowski, Elaine Mitchell, Cicely K. Macnamara, Mark A. J. Chaplain,
Computational Modelling of Cancer Development and Growth: Modelling at Multiple Scales and Multiscale Modelling,
2018,
80,
0092-8240,
1366,
10.1007/s11538-017-0292-3
|
|
7.
|
Paul Macklin, Hermann B. Frieboes, Jessica L. Sparks, Ahmadreza Ghaffarizadeh, Samuel H. Friedman, Edwin F. Juarez, Edmond Jonckheere, Shannon M. Mumenthaler,
2016,
Chapter 12,
978-3-319-42021-9,
225,
10.1007/978-3-319-42023-3_12
|
|
8.
|
Stefan Hoehme, Adrian Friebel, Seddik Hammad, Dirk Drasdo, Jan G. Hengstler,
2017,
Chapter 22,
978-1-4939-6504-5,
319,
10.1007/978-1-4939-6506-9_22
|
|
9.
|
P. Van Liedekerke, A. Buttenschön, D. Drasdo,
2018,
9780128117187,
245,
10.1016/B978-0-12-811718-7.00014-9
|
|
10.
|
Yafei Wang, Erik Brodin, Kenichiro Nishii, Hermann B. Frieboes, Shannon M. Mumenthaler, Jessica L. Sparks, Paul Macklin,
Impact of tumor-parenchyma biomechanics on liver metastatic progression: a multi-model approach,
2021,
11,
2045-2322,
10.1038/s41598-020-78780-7
|
|
11.
|
Waseem Asghar, Rami El Assal, Hadi Shafiee, Sharon Pitteri, Ramasamy Paulmurugan, Utkan Demirci,
Engineering cancer microenvironments for in vitro 3-D tumor models,
2015,
18,
13697021,
539,
10.1016/j.mattod.2015.05.002
|
|
12.
|
P. Van Liedekerke, M. M. Palm, N. Jagiella, D. Drasdo,
Simulating tissue mechanics with agent-based models: concepts, perspectives and some novel results,
2015,
2,
2196-4378,
401,
10.1007/s40571-015-0082-3
|
|
13.
|
Annelies Lejon, Bert Mortier, Giovanni Samaey,
Variance-Reduced Simulation of Multiscale Tumor Growth Modeling,
2017,
15,
1540-3459,
388,
10.1137/15M1043224
|
|
14.
|
H. L. Rocha, R. C. Almeida, E. A. B. F. Lima, A. C. M. Resende, J. T. Oden, T. E. Yankeelov,
A hybrid three-scale model of tumor growth,
2018,
28,
0218-2025,
61,
10.1142/S0218202518500021
|
|
15.
|
Mark A. J. Chaplain,
2020,
Chapter 7,
978-3-030-32856-6,
149,
10.1007/978-3-030-32857-3_7
|
|
16.
|
Chin F. Ng, Hermann B. Frieboes,
Model of vascular desmoplastic multispecies tumor growth,
2017,
430,
00225193,
245,
10.1016/j.jtbi.2017.05.013
|
|
17.
|
Mohammad Soheilypour, Mohammad R. K. Mofrad,
Agent‐Based Modeling in Molecular Systems Biology,
2018,
40,
0265-9247,
1800020,
10.1002/bies.201800020
|
|
18.
|
Andrés A. Barrea, Matias E. Hernández, Rubén Spies,
Optimal chemotherapy schedules from tumor entropy,
2017,
36,
0101-8205,
991,
10.1007/s40314-015-0275-7
|
|
19.
|
Kelvin K.L. Wong,
Three-dimensional discrete element method for the prediction of protoplasmic seepage through membrane in a biological cell,
2017,
65,
00219290,
115,
10.1016/j.jbiomech.2017.10.023
|
|
20.
|
Angela M. Jarrett, Ernesto A.B.F. Lima, David A. Hormuth, Matthew T. McKenna, Xinzeng Feng, David A. Ekrut, Anna Claudia M. Resende, Amy Brock, Thomas E. Yankeelov,
Mathematical models of tumor cell proliferation: A review of the literature,
2018,
18,
1473-7140,
1271,
10.1080/14737140.2018.1527689
|
|
21.
|
Lee-Ling Sharon Ong, Justin Dauwels, H. Harry Asada,
2013,
2D data-driven stalk cell prediction model based on tip-stalk cell interaction in angiogenesis,
978-1-4577-0216-7,
4537,
10.1109/EMBC.2013.6610556
|
|
22.
|
J. Tinsley Oden, Ernesto A. B. F. Lima, Regina C. Almeida, Yusheng Feng, Marissa Nichole Rylander, David Fuentes, Danial Faghihi, Mohammad M. Rahman, Matthew DeWitt, Manasa Gadde, J. Cliff Zhou,
Toward Predictive Multiscale Modeling of Vascular Tumor Growth,
2016,
23,
1134-3060,
735,
10.1007/s11831-015-9156-x
|
|
23.
|
Bing Wang, Fu Tan, Jia Zhu, Daijun Wei,
A new structure entropy of complex networks based on nonextensive statistical mechanics and similarity of nodes,
2021,
18,
1551-0018,
3718,
10.3934/mbe.2021187
|
|
24.
|
A. Carrasco-Mantis, T. Alarcón, J.A. Sanz-Herrera,
An in silico study on the influence of extracellular matrix mechanics on vasculogenesis,
2023,
231,
01692607,
107369,
10.1016/j.cmpb.2023.107369
|
|
25.
|
Cicely K. Macnamara,
Biomechanical modelling of cancer: Agent‐based force‐based models of solid tumours within the context of the tumour microenvironment,
2021,
1,
2689-9655,
10.1002/cso2.1018
|
|
26.
|
Ernesto A. B. F. Lima, Danial Faghihi, Russell Philley, Jianchen Yang, John Virostko, Caleb M. Phillips, Thomas E. Yankeelov, Stacey Finley,
Bayesian calibration of a stochastic, multiscale agent-based model for predicting in vitro tumor growth,
2021,
17,
1553-7358,
e1008845,
10.1371/journal.pcbi.1008845
|
|
27.
|
Adrianne L. Jenner, Munisha Smalley, David Goldman, William F. Goins, Charles S. Cobbs, Ralph B. Puchalski, E. Antonio Chiocca, Sean Lawler, Paul Macklin, Aaron Goldman, Morgan Craig,
Agent-based computational modeling of glioblastoma predicts that stromal density is central to oncolytic virus efficacy,
2022,
25,
25890042,
104395,
10.1016/j.isci.2022.104395
|
|
28.
|
Nina Verstraete, Malvina Marku, Marcin Domagala, Hélène Arduin, Julie Bordenave, Jean-Jacques Fournié, Loïc Ysebaert, Mary Poupot, Vera Pancaldi,
An agent-based model of monocyte differentiation into tumour-associated macrophages in chronic lymphocytic leukemia,
2023,
26,
25890042,
106897,
10.1016/j.isci.2023.106897
|
|
29.
|
Heber L. Rocha, Boris Aguilar, Michael Getz, Ilya Shmulevich, Paul Macklin,
A multiscale model of immune surveillance in micrometastases gives insights on cancer patient digital twins,
2024,
10,
2056-7189,
10.1038/s41540-024-00472-z
|
|