Research article Special Issues

Evaluating the impact of multiple factors on the control of COVID-19 epidemic: A modelling analysis using India as a case study


  • Received: 23 September 2022 Revised: 10 January 2023 Accepted: 11 January 2023 Published: 31 January 2023
  • The currently ongoing COVID-19 outbreak remains a global health concern. Understanding the transmission modes of COVID-19 can help develop more effective prevention and control strategies. In this study, we devise a two-strain nonlinear dynamical model with the purpose to shed light on the effect of multiple factors on the outbreak of the epidemic. Our targeted model incorporates the simultaneous transmission of the mutant strain and wild strain, environmental transmission and the implementation of vaccination, in the context of shortage of essential medical resources. By using the nonlinear least-square method, the model is validated based on the daily case data of the second COVID-19 wave in India, which has triggered a heavy load of confirmed cases. We present the formula for the effective reproduction number and give an estimate of it over the time. By conducting Latin Hyperbolic Sampling (LHS), evaluating the partial rank correlation coefficients (PRCCs) and other sensitivity analysis, we have found that increasing the transmission probability in contact with the mutant strain, the proportion of infecteds with mutant strain, the ratio of probability of the vaccinated individuals being infected, or the indirect transmission rate, all could aggravate the outbreak by raising the total number of deaths. We also found that increasing the recovery rate of those infecteds with mutant strain while decreasing their disease-induced death rate, or raising the vaccination rate, both could alleviate the outbreak by reducing the deaths. Our results demonstrate that reducing the prevalence of the mutant strain, improving the clearance of the virus in the environment, and strengthening the ability to treat infected individuals are critical to mitigate and control the spread of COVID-19, especially in the resource-constrained regions.

    Citation: Aili Wang, Xueying Zhang, Rong Yan, Duo Bai, Jingmin He. Evaluating the impact of multiple factors on the control of COVID-19 epidemic: A modelling analysis using India as a case study[J]. Mathematical Biosciences and Engineering, 2023, 20(4): 6237-6272. doi: 10.3934/mbe.2023269

    Related Papers:

  • The currently ongoing COVID-19 outbreak remains a global health concern. Understanding the transmission modes of COVID-19 can help develop more effective prevention and control strategies. In this study, we devise a two-strain nonlinear dynamical model with the purpose to shed light on the effect of multiple factors on the outbreak of the epidemic. Our targeted model incorporates the simultaneous transmission of the mutant strain and wild strain, environmental transmission and the implementation of vaccination, in the context of shortage of essential medical resources. By using the nonlinear least-square method, the model is validated based on the daily case data of the second COVID-19 wave in India, which has triggered a heavy load of confirmed cases. We present the formula for the effective reproduction number and give an estimate of it over the time. By conducting Latin Hyperbolic Sampling (LHS), evaluating the partial rank correlation coefficients (PRCCs) and other sensitivity analysis, we have found that increasing the transmission probability in contact with the mutant strain, the proportion of infecteds with mutant strain, the ratio of probability of the vaccinated individuals being infected, or the indirect transmission rate, all could aggravate the outbreak by raising the total number of deaths. We also found that increasing the recovery rate of those infecteds with mutant strain while decreasing their disease-induced death rate, or raising the vaccination rate, both could alleviate the outbreak by reducing the deaths. Our results demonstrate that reducing the prevalence of the mutant strain, improving the clearance of the virus in the environment, and strengthening the ability to treat infected individuals are critical to mitigate and control the spread of COVID-19, especially in the resource-constrained regions.



    加载中


    [1] World Health Organization, Coronavirus disease (COVID-19) Weekly Epidemiological Update and Weekly Operational Update, 2022. Available from: https://www.who.int/emergencies/diseases/novel-coronavirus-2019/situation-reports.
    [2] B. Tang, X. Wang, Q. Li, N. L. Bragazzi, S. Tang, Y. Xiao, et al., Estimation of the transmission risk of the 2019-nCoV and its implication for public health interventions, J. Clin. Med., 462 (2020), 1–13. https://doi.org/10.3390/jcm9020462 doi: 10.3390/jcm9020462
    [3] J. T. Wu, K. Leung, G. M. Leung, Nowcasting and forecasting the potential domestic and international spread of the 2019-nCoV outbreak originating in Wuhan, China: a modelling study, Lancet, 395 (2020), 689–697. https://doi.org/10.1016/S0140-6736(20)30260-9 doi: 10.1016/S0140-6736(20)30260-9
    [4] M. Al-Yahyai, F. Al-Musalhi, I. Elmojtaba, N. Al-Salti, Mathematical analysis of a COVID-19 model with different types of quarantine and isolation, Math. Biosci. Eng., 20 (2023), 1344–1375. https://doi.org/10.3934/mbe.2023061 doi: 10.3934/mbe.2023061
    [5] F. $\ddot Ozk\ddot ose$, M. Yavuz, Investigation of interactions between COVID-19 and diabetes with hereditary traits using real data: A case study in Turkey, Comput. Biol. Med., 141 (2022), 105044. https://doi.org/10.1016/j.compbiomed.2021.105044 doi: 10.1016/j.compbiomed.2021.105044
    [6] C. Huang, Y. Wang, X. Li, L. Ren, J. Zhao, Y. Hu, et al., Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China, Lancet, 395 (2020), 497–506. https://doi.org/10.1016/S0140-6736(20)30183-5 doi: 10.1016/S0140-6736(20)30183-5
    [7] K. Sarkar, S. Khajanchi, J. J. Nieto, Modeling and forecasting the COVID-19 pandemic in India, Chaos Soliton Fract, 139 (2020), 110049. https://doi.org/10.1016/j.chaos.2020.110049 doi: 10.1016/j.chaos.2020.110049
    [8] R. P. Kumar, P. K. Santra, G. S. Mahapatra, Global stability and analysing the sensitivity of parameters of a multiple-susceptible population model of SARS-CoV-2 emphasising vaccination drive, Math. Comput. Simulat., 203 (2023), 741–766. https://doi.org/10.1016/j.matcom.2022.07.012 doi: 10.1016/j.matcom.2022.07.012
    [9] Real time big data report on COVID-19, 2022. Available from: https://voice.baidu.com/act/newpneumonia/newpneumonia/?from = osari_aladin_banner#tab4..
    [10] E. Bontempi, M. Coccia, International trade as critical parameter of COVID-19 spread that outclasses demographic, economic, environmental, and pollution factors, Environ. Res., 201 (2021), 111514. https://doi.org/10.1016/j.envres.2021.111514 doi: 10.1016/j.envres.2021.111514
    [11] M. Coccia, Factors determining the diffusion of COVID-19 and suggested strategy to prevent future accelerated viral infectivity similar to COVID, Sci. Total Environ., 729 (2020), 138474. https://doi.org/10.1016/j.scitotenv.2020.138474 doi: 10.1016/j.scitotenv.2020.138474
    [12] M. Coccia, COVID-19 pandemic over 2020 (with lockdowns) and 2021 (with vaccinations): similar effects for seasonality and environmental factors, Environ. Res., 208 (2022), 112711. https://doi.org/10.1016/j.envres.2022.112711 doi: 10.1016/j.envres.2022.112711
    [13] E. Bontempi, M. Coccia, S. Vergalli, A. Zanoletti, Can commercial trade represent the main indicator of the COVID-19 diffusion due to human-to-human interactions? A comparative analysis between Italy, France, and Spain, Environ. Res., 201 (2021), 111529. https://doi.org/10.1016/j.envres.2021.111529 doi: 10.1016/j.envres.2021.111529
    [14] P. Asrani, M. S. Eapen, M. I. Hassan, S. S. Sohal, Implications of the second wave of COVID-19 in India. Lancet Resp. Med., 9 (2021), e93–e94. https://doi.org/10.1016/S2213-2600(21)00312-X doi: 10.1016/S2213-2600(21)00312-X
    [15] O. P. Choudhary, I. Singh, A. J. Rodriguez-Morales, Second wave of COVID-19 in India: dissection of the causes and lessons learnt, Travel Med. Infect. Dis., 43 (2021), 102126. https://doi.org/10.1016/j.tmaid.2021.102126 doi: 10.1016/j.tmaid.2021.102126
    [16] P. Asrani, K. Tiwari, M. S. Eapen, M. I. Hassan, S. S. Sohal, Containment strategies for COVID-19 in India: lessons from the second wave, Anti-Infect. Ther., 20 (2022), 1–7. https://doi.org/10.1080/14787210.2022.2036605 doi: 10.1080/14787210.2022.2036605
    [17] S. Ghosh, N. R. Moledina, M. M. Hasan, S. Jain, A. Ghosh, Colossal challenges to healthcare workers combating the second wave of coronavirus disease 2019 (COVID-19) in India, Infect. Control Hosp. Epidemiol., 43 (2021), 1–2. https://doi.org/10.1017/ice.2021.257 doi: 10.1017/ice.2021.257
    [18] A. Kumar, K. R. Nayar, S. F. Koya, COVID-19: Challenges and its consequences for rural health care in India, Public Health Pract., 1 (2020), 100009. https://doi.org/10.1016/j.puhip.2020.100009 doi: 10.1016/j.puhip.2020.100009
    [19] S. P. Mampatta, Rural India vs Covid-19: train curbs a relief but challenges remain, Bus. Stand., 23 (2020).
    [20] X. Wang, Q. Li, X. Sun, S. He, F, Xia, P. Song, et al., Effects of medical resource capacities and intensities of public mitigation measures on outcomes of COVID-19 outbreaks, BMC Public Health, 21 (2021), 1–11. https://doi.org/10.1186/s12889-021-10657-4 doi: 10.1186/s12889-021-10657-4
    [21] B. Sen-Crowe, M. Sutherland, M. McKenney, A. Elkbuli, A closer look into global hospital beds capacity and resource shortages during the COVID-19 pandemic, J. Surg. Res., 260 (2021), 56–63. https://doi.org/10.1016/j.jss.2020.11.062 doi: 10.1016/j.jss.2020.11.062
    [22] J. Li, P. Yuan, J. Heffernan, T. Zheng, N. Ogden, B. Sander, et al., Fangcang shelter hospitals during the COVID-19 epidemic, Wuhan, China, Bull. W. H. O., 98 (2020), 830–841D. https://doi.org/10.2471/BLT.20.258152 doi: 10.2471/BLT.20.258152
    [23] G. Sun, S. Wang, M. Li, L. Li, J. Zhang, W. Zhang, et al., Transmission dynamics of COVID-19 in Wuhan, China: effects of lockdown and medical resources, Nonlinear Dynam., 101 (2020), 1981–1993. https://doi.org/10.1007/s11071-020-05770-9 doi: 10.1007/s11071-020-05770-9
    [24] A. Wang, J. Guo, Y. Gong, X. Zhang, Y. Rong, Modeling the effect of Fangcang shelter hospitals on the control of COVID-19 epidemic, Math. Method Appl. Sci., (2022), 1–16. https://doi.org/10.1002/mma.8427 doi: 10.1002/mma.8427
    [25] Y. Fu, S. Lin, Z. Xu, Research on quantitative analysis of multiple factors affecting COVID-19 spread, Int. J. Environ. Res. Public Health, 19 (2022), 3187. https://doi.org/10.3390/ijerph19063187 doi: 10.3390/ijerph19063187
    [26] World Health Organization, Tracking SARS-CoV-2 variants, 2022. Available from: https://www.who.int/en/activities/tracking-SARS-CoV-2-variants
    [27] T. Li, Y. Guo, Modeling and optimal control of mutated COVID-19 (Delta strain) with imperfect vaccination, Chaos Soliton Fract, 156 (2022), 111825. https://doi.org/10.1016/j.chaos.2022.111825 doi: 10.1016/j.chaos.2022.111825
    [28] I. Alam, A. Radovanovic, R. Incitti, An interactive SARs-Cov-2 mutation tracker, with a focus on critical variants, Lancet Infect. Dis., 21 (2021), 602. https://doi.org/10.1016/S1473-3099(21)00078-5 doi: 10.1016/S1473-3099(21)00078-5
    [29] T. Phan, Genetic diversity and evolution of sars-cov-2, Infect. Genet. Evol., 81 (2020), 104260. https://doi.org/10.1016/j.meegid.2020.104260 doi: 10.1016/j.meegid.2020.104260
    [30] R. Sonabend, L. K. Whittles, N. Imai, P. N. Perez-Guzman, E. S Knock, T. Rawson, et al., Non-pharmaceutical interventions, vaccination, and the SARS-CoV-2 delta variant in England: a mathematical modelling study, Lancet, 398 (2021), 1825–1835. https://doi.org/10.1016/S0140-6736(21)02276-5 doi: 10.1016/S0140-6736(21)02276-5
    [31] M. Betti, N. Bragazzi, J. Heffernan, J. Kong, A. Raad, Could a new covid-19 mutant strain undermine vaccination efforts? a mathematical modelling approach for estimating the spread of B.1.1.7 using Ontario, Canada, as a case study, Vaccines, 9 (2021), 592. https://doi.org/10.3390/vaccines9060592 doi: 10.3390/vaccines9060592
    [32] S. A. Madhi, G. Kwatra, J. E. Myers, W. Jassat, N. Dhar, C. K. Mukendi, et al., Population immunity and COVID-19 severity with Omicron variant in South Africa, New Engl. J. Med., 386 (2022), 1314–1326. https://doi.org/10.1056/NEJMoa2119658 doi: 10.1056/NEJMoa2119658
    [33] M. K. Hossain, M. Hassanzadeganroudsari, V. Apostolopoulos, The emergence of new strains of SARS-CoV-2. What does it mean for COVID-19 vaccines? Expert Rev. Vaccines, 20 (2021), 635–638. https://doi.org/10.1080/14760584.2021.1915140 doi: 10.1080/14760584.2021.1915140
    [34] O. Khyar, K. Allali, Global dynamics of a multi-strain SEIR epidemic model with general incidence rates: application to COVID-19 pandemic, Nonlinear Dynam., 102 (2021), 489–509. https://doi.org/10.1007/s11071-020-05929-4 doi: 10.1007/s11071-020-05929-4
    [35] B. H. Foy, B. Wahl, K. Mehta, A. Shet, G. I Menon, C. Britto, et al., Comparing COVID-19 vaccine allocation strategies in India: A mathematical modelling study, Int. J. Infect. Dis., 103 (2021), 431–438. https://doi.org/10.1101/2020.11.22.20236091 doi: 10.1101/2020.11.22.20236091
    [36] World Health Organization, Listings of WHO's response to COVID-19, 2020. Available from: https://www.who.int/news/item/29-06-2020-covidtimeline.
    [37] K. Hattaf, A. A. Mohsen, J. Harraq, N. Achtaic, Modeling the dynamics of COVID-19 with carrier effect and environmental contamination, Int. J. Model. Simul. Sci. Comput., 12 (2021), 2150048. https://doi.org/10.1142/S1793962321500483 doi: 10.1142/S1793962321500483
    [38] G. Webb, C. Browne, X. Huo, M. Seydi, O. Seydi, G, Webb, et al., A model of the 2014 Ebola epidemic in West Africa with contact tracing, PLoS Currents, 7 (2015). https://doi.org/10.1371/currents.outbreaks.846b2a31ef37018b7d1126a9c8adf22a
    [39] R. Swain, J. Sahoo, S. P. Biswal, A. Sikary, Management of mass death in COVID-19 pandemic in an Indian perspective, Disaster Med. Public, 16 (2022), 1152–1155. https://doi.org/10.1017/dmp.2020.399 doi: 10.1017/dmp.2020.399
    [40] P. A. Naik, J. Zu, M. B. Ghori, Modeling the effects of the contaminated environments on COVID-19 transmission in India, Results Phys., 29 (2021), 104774. https://doi.org/10.1016/j.rinp.2021.104774 doi: 10.1016/j.rinp.2021.104774
    [41] S. S. Musa, A. Yusuf, S. Zhao, Z. U. Abdullahi, H. Abu-Odah, F. T. Sa'ad, et al., Transmission dynamics of COVID-19 pandemic with combined effects of relapse, reinfection and environmental contribution: A modeling analysis, Results Phys., 38 (2022), 105653. https://doi.org/10.1016/j.rinp.2022.105653 doi: 10.1016/j.rinp.2022.105653
    [42] C. Yang, J. Wang, Transmission rates and environmental reservoirs for COVID-19 - a modeling study, J. Biol. Dynam., 15 (2021), 86–108. https://doi.org/10.1080/17513758.2020.1869844 doi: 10.1080/17513758.2020.1869844
    [43] M. Mohamadi, A. Babington-Ashaye, A. Lefort, A. Flahault, Modeling the effects of the contaminated environments on COVID-19 transmission in India, Results Phys., 29 (2021), 104774. https://doi.org/10.1016/j.rinp.2021.104774 doi: 10.1016/j.rinp.2021.104774
    [44] P. A. Naik, M. Yavuz, S. Qureshi, J. Zu, S. Townley, Modeling and analysis of COVID-19 epidemics with treatment in fractional derivatives using real data from Pakistan. Eur. Phys. J. Plus., 135 (2020), 1–42. https://doi.org/10.1140/epjp/s13360-020-00819-5 doi: 10.1140/epjp/s13360-020-00819-5
    [45] P. A. Naik, K. M. Owolabi, J. Zu, M. Naik, Modeling the transmission dynamics of COVID-19 pandemic in Caputo type fractional derivative. J. Multiscale Model., 12 (2021), 2150006. https://doi.org/10.1142/S1756973721500062 doi: 10.1142/S1756973721500062
    [46] The Guardian, Death and despair at the doors of stricken Delhi hospital, 2021. Available from: https://guardian.ng/news/death-and-despair-at-the-doors-of-stricken-delhi-hospital
    [47] Global News, India's COVID-19 needs are large and diverse. Doctors, aides welcome global help, 2021. Available from: https://globalnews.ca/news/7819412/india-covid-crisis-doctors-red-cross
    [48] V. Strejc, Least squares parameter estimation, Automatica, 16 (1980), 535–550. https://doi.org/10.1016/S1474-6670(17)53975-0 doi: 10.1016/S1474-6670(17)53975-0
    [49] M. A. Khan, A. Atangana, Modeling the dynamics of novel coronavirus (2019-nCov) with fractional derivative, Alex Eng. J., 59 (2020), 2379–2389. https://doi.org/10.1016/j.aej.2020.02.033 doi: 10.1016/j.aej.2020.02.033
    [50] P. Driessche, J. Watmough, Reproduction numbers and sub-threshold endemic equilibria for compartmental models of disease transmission, Math. Biosci., 180 (2002), 29–48. https://doi.org/10.1016/S0025-5564(02)00108-6 doi: 10.1016/S0025-5564(02)00108-6
    [51] S. Marino, I. B. Hogue, C. J. Ray, D. E Krischner, A methodology for performing global uncertainty and sensitivity analysis in systems biology, J. Theor. Biol., 254 (2008), 178–196. https://doi.org/10.1016/j.jtbi.2008.04.011 doi: 10.1016/j.jtbi.2008.04.011
    [52] Daily News, India crosses 300,000 COVID deaths, 2021. Available from: https://www.dailynews.lk/2021/05/24/world/250039/india-crosses-300000-covid-deaths.
    [53] Global News, India has 414K COVID-19 deaths to date. The actual toll could be 10 times higher, 2021. Available from: https://globalnews.ca/news/8042640/india-covid-19-deaths-toll-10-times-higher/.
    [54] C. Z. Guilmoto, An alternative estimation of the death toll of the Covid-19 pandemic in India, PloS One, 17 (2022), e0263187. https://doi.org/10.1371/journal.pone.0263187 doi: 10.1371/journal.pone.0263187
    [55] M. Coccia, Optimal levels of vaccination to reduce COVID-19 infected individuals and deaths: A global analysis. Environ. Res., 204 (2022), 112314. https://doi.org/10.1016/j.envres.2021.112314 doi: 10.1016/j.envres.2021.112314
    [56] I. Benati, M. Coccia, Global analysis of timely COVID-19 vaccinations: improving governance to reinforce response policies for pandemic crises. Int. J. Health Gov., 27 (2022), 240–153. https://doi.org/10.1108/IJHG-07-2021-0072 doi: 10.1108/IJHG-07-2021-0072
  • Reader Comments
  • © 2023 the Author(s), licensee AIMS Press. This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0)
通讯作者: 陈斌, bchen63@163.com
  • 1. 

    沈阳化工大学材料科学与工程学院 沈阳 110142

  1. 本站搜索
  2. 百度学术搜索
  3. 万方数据库搜索
  4. CNKI搜索

Metrics

Article views(1806) PDF downloads(111) Cited by(1)

Article outline

Figures and Tables

Figures(14)  /  Tables(5)

Other Articles By Authors

/

DownLoad:  Full-Size Img  PowerPoint
Return
Return

Catalog