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Study of jack bean urease interaction with luteolin by the extended solvation model and docking simulation

  • Received: 16 July 2020 Accepted: 26 September 2020 Published: 12 October 2020
  • In this study, the interaction between Luteolin and urease was made at 300 K in aqueous buffer solutions using isothermal titration calorimetry. The extended solvation model was used to calculate the solvation parameters. Moreover, to determine the interaction of Luteolin with Jack Bean Urease (JBU), a molecular docking process was performed. The purpose of this investigation was to measure the inhibitory effects of Luteolin on the activity and structure of urease. Molecular docking analysis confirmed the extended solvation model.

    Citation: Maryam Mazinani, Gholamreza Rezaei Behbehani, Nematollah Gheibi, Alireza Farasat. Study of jack bean urease interaction with luteolin by the extended solvation model and docking simulation[J]. AIMS Biophysics, 2020, 7(4): 429-435. doi: 10.3934/biophy.2020029

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  • In this study, the interaction between Luteolin and urease was made at 300 K in aqueous buffer solutions using isothermal titration calorimetry. The extended solvation model was used to calculate the solvation parameters. Moreover, to determine the interaction of Luteolin with Jack Bean Urease (JBU), a molecular docking process was performed. The purpose of this investigation was to measure the inhibitory effects of Luteolin on the activity and structure of urease. Molecular docking analysis confirmed the extended solvation model.


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    Conflict of interest



    The authors declare no conflict of interest.

    [1] Kafarski P, Talma M (2018) Recent advances in design of new urease inhibitors: A review. J Adv Res 13: 101-112.
    [2] Behbehani GR, Saboury AA, Taleshi E (2018) Determination of partial unfolding enthalpy for lysozyme upon interaction with dodecyltrimethylammonium bromide using an extended solvation model. J Mol Recogn: Interdisciplinary J 21: 132-135.
    [3] Shalbafan M, Behbehani GR, Divsalar A (2018) The effect of methotrexate on the structure changes of human serum. Int J 74: 60-67.
    [4] Jiang R, Poschet G, Owen R, et al. (2019) Serum concentration of genistein, luteolin and colorectal cancer prognosis. Nutrients 11: 600.
    [5] Behbehani GR, Divsalar A, Saboury AA, et al. (2009) A thermodynamic study on the binding of PEG-stearic acid copolymer with lysozyme. J Solution Chem 38: 219.
    [6] Trott O, Olson AJ (2010) AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading. J Comput Chem 31: 455-461.
    [7] Wallace AC, Laskowski RA, Thornton JM (1995) LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions. Protein Eng, Des Sel 8: 127-134.
    [8] Zolghadr L, Rezaei Behbehani G (2019) Thermodynamic study of comfarol binding to urease. Orbital: Electron J Chem 11: 151-154.
    [9] Mohammadian M, Rezaei Behbehani G, Ghalami-Choobar B, et al. (2019) A thermodynamic study on the binding of polyethyleneglycol 1500 stearic acid with lysozyme. Orbital: Electron J Chem 11: 422-426.
    [10] Payeghadr M, Rezaei Behbehani G, Shalbafan M (2017) Lanthanide chlorides decrease the antioxidant property of human serum albumin. Orbital: Electron J Chem 9: 72-75.
    [11] Lemeski ET, Behbehani GR, Saboury AA, et al. (2011) Thermodynamic study of the binding of mercury ion to human growth hormone at different temperatures. J Solution Chem 40: 575-586.
    [12] Poursoleiman A, Karimi-Jafari MH, Zolmajd-Haghighi Z, et al. (2019) Polymyxins interaction to the human serum albumin: A thermodynamic and computational study. Spectrochim Acta A 217: 155-163.
    [13] Jamali Z, Rezaei Behbehani G, Zare K, et al. (2019) Effect of chrysin omega-3 and 6 fatty acid esters on mushroom tyrosinase activity, stability, and structure. J Food Biochem 43: e12728.
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